Click a category to view publications:
Mass and Heat Transfer Textbook
- Russell, T.W.F., Robinson, A.S., and
Wagner, N.J., (2008) Mass and Heat Transfer: Analysis of
Mass Contactors and Heat Exchangers, Cambridge University
Press, Cambridge, UK (www.cambridge.org/9780521886703).
G-protein Coupled Receptors (7-Helix Transmembrane
Proteins)
- Naranjo, A.N., Chevalier, A., Cousins, G.D., Ayettey,
E., McCusker, E.C., Wenk, C., and Robinson,
A.S. (2015) "Conserved disulfide bond is not
essential for the adenosine A2A receptor: extracellular
cysteines influence receptor distribution within the cell
and ligand-binding recognition", BBA
Biomembranes, 1848: 603-614 Available on-line Dec
5 2014
- Blocker, K.M., Britton, Z.T., Naranjo, A.N., McNeely,
P.M., Young, C.L., and Robinson,
A.S. (2015) "Recombinant G protein-coupled
receptor expression in Saccharomyces cerevisiae for
protein characterization", in “Membrane Proteins –
Production and Function Characterization”, Methods
Enzymol., 556:165-83
- McNeely, P.M., Naranjo, A.N., and Robinson,
A.S. (2012) "Structure-function studies with
G-protein coupled receptors as a paradigm for improving
drug discovery and therapeutic development", Biotechnology
Journal, 7(12): 1451-1461.
- Britton, Z.T., Hanle, E., and Robinson,
A.S. (2012) "An Expression and Purification
System for the Biosynthesis of Adenosine Receptor Peptides
for Biophysical and Structural Characterization", Protein
Exp. Purif., 84:224-235
- O’Malley, M.A., Helgeson, M.E., Wagner, N.J., and Robinson,
A.S. (2011) “Toward Rational Design of Protein
Detergent Complexes: Determinants of Mixed Micelles that
are Critical for the in vitro Stabilization of a G-protein
Coupled Receptor”, Biophysical
Journal, 101 (8): 1938-1948
- Robinson, A.S., ed (2011) "Production
of Membrane Proteins – Strategies for Expression and
Isolation", Wiley VCH.
- O’Malley, M.A., Naranjo, A.N., Lazarova, T., and Robinson,
A.S.* (2010) “Analysis of Adenosine A2a
Receptor Stability: Effects of Ligands and Disulfide
Bonds,” Biochemistry, Nov 2;49(43):9181-9.
- O'Malley, M.A., Helgeson, M.E., Wagner, N.J., and Robinson,
A.S.* (2011) "The morphology and composition of
cholesterol-rich micellar nanostructures determine
transmembrane protein (GPCR) Activity", Biophysical
Journal, 100(2): L11-13.
- Robinson, A.S* (2011) “New Tools for
Breaking Barriers to GPCR Expression in E. coli” Journal
of Molecular Biology. 408 (4): 597-598.
- Britton, Z., Young, C.L., Can, O., McNeely, P., Naranjo,
A.N., and Robinson, A. S.* (2011),
“Membrane protein expression in yeast Saccharomyces
cerevisiae” in Production of Membrane Proteins –
Strategies for Expression and Isolation, Wiley VCH, Robinson,
A.S., ed.
- O'Malley, M.A., Mancini, J.D.†, Young, C.L., McCusker,
E.C., Raden, D., and Robinson A.S*. (2009)
“Progress toward heterologous expression of active
G-protein-coupled receptors in Saccharomyces cerevisiae:
Linking cellular stress response with translocation and
trafficking.” Protein Sci. 18(11):2356-70.
- McCusker, E., and Robinson, A.S.*, (2008)
"Refolding of G protein α subunits from inclusion bodies
expressed in Escherichia coli," Protein
Exp. Purif., Apr;58(2): 342-55. Epub 2007 Dec 8.
- McCusker, E., Bane, S.E., O’Malley, M., and Robinson,
A.S.* (2007), “Heterologous GPCR expression: A
bottleneck to obtaining crystal structures”, Biotech
Progress, May-Jun;23(3):540-7.
- O’Malley, M., Lazarova, T., Britton, Z.T., and Robinson,
A.S. * (2007) “High-level expression in Saccharomyces
cerevisiae enables isolation and spectroscopic
characterization of functional human adenosine A2a
receptor”, J. Struct Biol., 159(2): 166-178.
- Bane, S.E., Velasquez, J.E. †, and Robinson,
A.S. * (2007) “Expression and purification of
milligram levels of inactive G-protein coupled receptors
in E. coli”, Protein Expression and
Purification, 52(2):348:355.
- Niebauer, R. T., and Robinson, A.S. * (2006)
“Exceptional total and functional yields of the human
adenosine (A2a) receptor expressed in the yeast
Saccharomyces cerevisiae”, Prot. Exp. Purif.,
46, p. 204-211.
- Wedekind, A.L. †, O’Malley, M., Niebauer, R.T., and Robinson,
A.S. * (2006) Optimization of the Human Adenosine
A2a Receptor Yields in Saccharomyces cerevisiae,
Biotechnology Progress, 22(5):1249-55.
- Niebauer, R. T. and Robinson, A.S.(2004)
“Saccharomyces cerevisiae protein expression:
From protein production to protein engineering” in
Expression Technologies, Horizon Scientific Press.
- Niebauer, R.T., Wedekind, A. and Robinson, A.S.
* (2004) “Decreases in yeast expression yields of
the human adenosine receptor are a result of translational
or post-translational events”, Protein Exp. Purif.,
37 (1) 134-143.
- Butz, J., Niebauer, R. T., and Robinson, A.S. (2003),
“Co-expression of molecular chaperones does not improve
the heterologous expression of mammalian G-Protein coupled
receptor expression in yeast,” Biotech. Bioeng,
84 (3) 292-304.
Stress Response And Chaperone Interactions
- Young, C.L. and Robinson,
A.S.* (2014) "Protein Folding and Secretion:
Mechanistic Insights Advancing Recombinant Protein
Production in S. cerevisiae", Current
Opinion in Biotechnology, 30: 168-177.
- Griesemer, M., Young, C., Robinson,
A.S., Petzold, L.* (2014) "BiP Clustering
Facilitates Protein Folding in the Endoplasmic Reticulum",
PLOS Computational
Biology, 10(7):1-16
- Young, C.L., Raden, D.L., Robinson,
A.S. (2013) "Analysis of ER Resident Proteins in
S. cerevisiae: Implementation of H/KDEL Retrieval
Sequences", Traffic,
14(4):365-81
- Young, C.L., Raden, D.L., Caplan, J., Czymmek, K., Robinson,
A.S. (2012) “Cassette Series Designed for
Live-Cell Imaging of Proteins and High Resolution
Techniques in Yeast”,
Yeast, Mar;29(3-4):119-36.
- Young, C.L., Britton, Z.T., Robinson,
A.S. (2012) “Recombinant Protein Expression and
Purification: A Comprehensive Review of Affinity Tags and
Microbial Applications” Biotechnology
Journal, May;7(5):620-34.
- Young C.L., Yuraszeck T., Robinson A.S.*
(2011) “Decreased secretion and unfolded protein response
upregulation,” Methods Enzymol. 491:235-60.
- Griesemer, M., Young, C.L., Doyle III, F.J.,
Robinson, A.S. and Petzold, L.* (2011) Spatial
Localization of Chaperone Distribution in the Endoplasmic
Reticulum of Yeast, IET Systems Biology,
6(2):54-63.
- Spatara, ML and Robinson, A.S.* (2010)
“Transgenic mouse and cell culture models demonstrate a
lack of mechanistic connection between endoplasmic
reticulum stress and tau dysfunction” Journal of
Neuroscience Research, 88(9):1951-61.
- Yuraszeck, T.M., Neveu, P., Rodriguez-Fernandez, M., Robinson,
A.S., Kosik, K.S., Doyle III, F.J.* (2010)
"Vulnerabilities in the Tau Network and The Role of
Ultrasensitive Points in Tau Pathophysiology", PLoS
Computational Biology, 6(11): e1000997.
doi:10.1371/journal.pcbi.1000997 (with cover art).
- Xu, P. and Robinson, A.S.* (2009) “Decreased
secretion and unfolded protein response up-regulation are
correlated with intracellular retention for single-chain
antibody variants produced in yeast” Biotech &
Bioeng, 104(1):20-9.
- Hildebrandt, S.,Raden, D, Petzold, L, Robinson, A.S.,
and Doyle III, F.J.* (2008) “A top-down approach to
mechanistic biological modeling: application to the
single-chain antibody folding pathway”, Biophysical
Journal, 95(8):3535-58. Epub 2008 Jul 18.
- Famá, M.C., Raden, D., Zacchi, N., Lemos, D.R., Robinson,
A.S., and Silberstein, S. * (2007) “The Saccharomyces
cerevisiae YFR041C/ERJ5 gene encoding a type I
membrane protein with a J domain is required to preserve
the folding capacity of the endoplasmic reticulum” Biochim
Biophys Acta, 1773(2):232-42.
- Griesemer, M., Young, C., Raden, D., Petzold, L., Robinson,
A.S., Doyle, F.J. * (2007) “Computational Modeling
of Chaperone Interactions in the Endoplasmic Reticulum of
Saccharomyces cerevisiae.” Proc. Int. Conf.
Foundations of Systems Biology, Stuttgart, Germany.
- Yuraszeck, T., Raden, D, Robinson, A.S., and
Doyle, F.J.* (2007) “Microarray Analysis of the Unfolded
Protein Response in S. cerevisiae Reveals
Evidence of Down-regulation.” Proc. Int. Conf. Foundations
of Systems Biology, Stuttgart, Germany.
- Xu, P., Raden, D., Doyle, F.J. III, and Robinson, A.S.
* (2005) “Analysis of unfolded protein response
during single-chain antibody expression in Saccaromyces
cerevisiae reveals different roles for BiP and PDI
in folding”, Metabolic Engineering, 7 (4)
269-279.
- Raden, D., Hildebrandt, S, Xu, P., Bell, E. †, Doyle,
III, F.J. and Robinson, A.S. * (2005),
“Analysis of cellular response to protein overexpression.”
IEE Proceedings: Systems Biology 152 (4) 285-289.
- Hildebrandt, S., D. Raden, E. Bell†, Robinson, A.S.
, and F.J. Doyle III* (2005) “Modeling the Unfolded
Protein Response in Saccharomyces Cerevisiae”, Proc. Int.
Conf. Foundations of Systems Biology, Santa Barbara,
California.
- Kauffman, K., Pridgen, E.M., Doyle, F.J. III, Dhurjati,
P., and Robinson, A.S. (2002) “Decreased
Protein Expression and Oscillating BiP Levels Result
during Heterologous Protein Expression in S.
cerevisiae,” Biotech. Prog., 18, 942-940.
DOI: 10.1021/bp025518g
- Kauffman, K., Dhurjati, P. , Robinson, A.S.
and F.J. Doyle III , “Framework for Modeling Information
Flow in Biological Processes: Application to the Unfolded
Protein Response.” Proc. IFAC Conf. Comput. Appl.
Biotech (CAB), 2001.
- Robinson, A.S., Bockhaus, J.A.,
Voegler, A.C.and Wittrup, K.D. (1996) “Reduction of BiP
levels decreases heterologous protein secretion in Saccharomyces
cerevisiae” J. Biol. Chem. 271,
10017-10022.
- Robinson, A.S. and Lauffenburger,
D.A.(1996) “Model for ER Chaperone Dynamics and Secretory
Protein Interactions.” AIChE J. 42, 1443-1453.
- Robinson, A.S. and K.D. Wittrup (1995)
“Constitutive Overexpression of Secreted Heterologous
Proteins Decreases Extractable BiP and PDI Levels in Saccharomyces
cerevisiae.” Biotech Prog. 11, 171-177.
- Wittrup , K.D., Robinson, A.S.,
Parekh, R.N. and Forrester, K.J. (1994) “Existence of an
Optimal Expression Level for Secretion of Foreign Proteins
in Yeast.” Ann. N.Y. Acad. Sci. 745, 321-330.
- Robinson, A.S., V. Hines, and K.D.
Wittrup (1994) “Overexpression of Protein Disulfide
Isomerase Increases Secretion of Foreign Proteins in the
Yeast Saccharomyces cerevisiae.” Bio/Tech.
12, 381-384.
- "Foreign Proteins in Eucaryotic Cells.” in Protein
Folding: In vivo and In vitro. ACS Symposium
Series 526. Jeffrey Cleland, Ed., 121-132.
- Robinson, A.S. and Wittrup, K.D. . “Methods for
Increasing Secretion of Overexpressed Proteins.” Patent #
5,773,245. Filed 10/92. Accepted 6/30/98.
Protein Aggregation and Refolding
- Wu, H., Truncali, K., Ritchie, J., Kroe-Barrett, R.,
Singh, S., Robinson,
A.S., Roberts, C.J.* (2015) "Weak protein
interactions and pH- and temperature-dependent aggregation
of human Fc1", mAbs,
in press
- Wu, H., Kroe-Barrett, R., Singh, S., Robinson,
A.S., Roberts, C.J.* (2014) "Competing
aggregation pathways for monoclonal antibodies", FEBS
Letters, 588(6): 936-941.
- Maurer, R.W., Hunter, A.K., Robinson,
A.S.*, and Roberts, C.J.* (2014) "Aggregates of
alpha-chymotrypsinogen anneal to access more stable
states", Biotechnology
& Bioengineering, 111 (4): 782-791.
- Maurer, R.W., Hunter, A.K., Wang, X., Wang, W.K., Robinson,
A.S., and Roberts, C.J.* (2013) "Folding and
aggregation of a multi-domain engineered immunotoxin", Biochemical
Engineering Journal, 81: 8-14.
- Blanco, M., Sahin, E., Robinson,
A.S., Roberts, C.* (2013) "Coarse-Grained Model
for Colloidal Protein Interactions, B22, and Protein
Cluster Formation", The
Journal of Physical Chemistry, Part
B, Dec 19;117(50):16013-28
- Costanzo, J.A., O’Brien, C.J., Tiller, K.†, Tamargo,
E.†, Robinson, A.S.,
Roberts, C.J., and Fernandez, E.J.* (2013) "Computational
Design to Control Protein Aggregation Rates Through
Conformational Stability", Protein
Eng, Des, & Sel, 27 (5): 157-167
- Morozova, O.A, March, Z.M.†, Robinson,
A.S., Colby, D.W.* (2013) "Conformational
features of tau fibrils from Alzheimer's disease brain are
faithfully propagated by unmodified recombinant protein",
Biochemistry,
52(40):6960-7.
- Sahin, E., Jordan, J.L., Spatara, M.L., Naranjo, A.N.,
Weiss IV, W.F., Robinson, A.S,
Fernandez, E.J.*, Roberts, C.J.* (2011) “Computational
Design and Biophysical Characterization of
Aggregation-Resistant Point Mutations for γD Crystallin
Illustrate a Balance of Conformational Stability and
Intrinsic Aggregation Propensity”, Biochemistry,
Feb 8;50(5):628-39.
- Spatara, ML, Roberts, CJ, and Robinson, A.S.*
(2009) “Kinetic folding studies of the P22 tailspike
beta-helix domain reveal multiple unfolded states.” Biophys
Chem. 141(2-3):214-21.
- Webber T, Gurung S, Saul J, Baker T, Spatara M, Freyer
M, Robinson A.S., and Gage MJ* (2009) “The
C-terminus of the P22 tailspike protein acts as an
independent oligomerization domain for monomeric
proteins.”, Biochem J. 2009 May
1;419(3):595-602.
- Gage, M.J, Lefebvre, B.G., and Robinson, A.S.*
(2006) “Determinants of Protein Folding and Aggregation in
P22 Tailspike,” in Misbehaving Proteins, ACS Publications,
eds. Regina Murphy and Amos Tsai.
- Kim, J. and Robinson, A.S. * (2006) Dissociation
of intermolecular disulfide bonds in P22 tailspike protein
intermediates in the presence of SDS, Protein Science,
15 (7), p. 1791-3.
- Gage, M.J., Zak, J. and Robinson, A.S. *
(2005) “Three Amino Acids that are Critical to Formation
and Stability of the P22 Tailspike Trimer”, Protein
Science, 14 (9) 2333-43.
- Lefebvre, B.G., Gage, M.J., and Robinson, A.S.
(2004) “Maximizing Recovery of Native Protein from
Aggregates by Optimizing Pressure Treatment,” Biotechnology
Progress, 20, 2, p. 623-629. 10.1021/bp034221v.
- Lefebvre, B.G., Comolli, N.K., Gage, M.J. and A.S.
Robinson * (2004), “Pressure dissociation studies
provide insight into oligomerization competence of
temperature-sensitive mutants of P22 tailspike,” Protein
Sci., 13 (6) 1538-46.
- Danek, B.L. and Robinson, A.S.* (2004) “P22
tailspike trimer assembly is governed by interchain redox
associations,” Biochem. Biophys. Acta,
1700(1):105-16. [5]
- Gage, M.J. and Robinson, A. S. (2003)
“C-terminal Hydrophobic Interactions Play a Critical role
in Oligomeric Assembly of the P22 Tailspike Trimer,” Protein
Sci., 12, 12, p. 2732-47.
- Lefebvre, B.G., and Robinson, A.S.
(2003), “Pressure treatment of tailspike aggregates
rapidly produces on-pathway folding intermediates,” Biotech.
Bioeng, 82, 5, p. 595-604. DOI: 10.1002/bit.10607
- Danek, B.L., and Robinson, A. S.
(2003) “Non-native interactions between cysteines direct
productive assembly of P22 tailspike protein,” Biophys
J., 85, 5, p. 1-11.
- Sinacola, J. and Robinson, A. S.
(2002) “Rapid refolding and polishing of single-chain
antibodies from E. coli inclusion bodies” Protein
Exp. Purif., Vol. 26, No. 2, Nov 2002, pp. 301-308.
DOI: 10.1016/S1046-5928(02)00538-7.
- Haase-Pettingell, C., Betts, S., Raso, S.W., Stuart, L.,
Robinson, A.S. and J. King (2001), “Role
for Cysteine Residues in the In Vivo Folding and Assembly
of the Phage P22 Tailspike,” Protein Sci. 10,
397-410.
- Robinson, A.S. and J. King , (1997)
“Disulfide-Bonded Intermediate on the Folding and Assembly
Pathway of a Non-Disulfide Bonded Protein.” Nature
Struct. Biol., 4, 450-455.
- Foguel, D., Robinson, C.R., Caetano de Sousa Jr., P.,
Silva, J. L., Robinson A.S. (1999),
“Hydrostatic Pressure Rescues Protein Aggregates”, Biotech.
Bioeng. 63, 552-558.
- Robinson, A.S., D. Foguel, J.L. Silva,
C.R. Robinson. “Use of Hydrostatic Pressure to Inhibit and
Reverse Protein Aggregation and Facilitate Protein
Refolding.” US Patent # 7,615,617. Filed 10/99. Issued
11/10/09.
- King , J., Haase-Pettingell, C., Robinson, A.
S., Speed, M and Mitraki, A. (1996)
“Thermolabile Folding Intermediates: Inclusion Body
Precursors and Chaperonin Substrates” FASEB J.,
10, 57-66.
Extermophilic Protein Expression - beta Glucosidase (CelB)
and Pyrolysin
- Powers, S.L. and Robinson, A. S.*
(2007) “PDI Improves Secretion of Redox-Inactive
b-glucosidase”, Biotech Prog.,
Mar-Apr;23(2):364-9. E-pub Feb 22, DOI: 10.1021/bp060287p
- Powers, S.L., Robinson, C.R., and Robinson, A.S.
* (2007) Denaturation of an Extremely Stable
Hyperthermophilic Protein Occurs via a Dimeric
Intermediate, Extremophiles, 11(1):179-89.
- Smith, J.D., Richardson, N.E. and Robinson, A.
S.* (2005) “Elevated expression temperature in
a mesophilic host results in increased secretion of a
hyperthermophilic enzyme and decreased cell stress,” Biochem.
Biophys. Acta, 1752 (1) 18-25.
- Smith, J.D., Tang, B.C., and Robinson, A. S.(2004)
“Protein disulfide isomerase, but not binding protein,
overexpression enhances secretion of a
non-disulfide-bonded protein in yeast”, Biotech.
Bioeng., 85, 3, p. 340-50.
- Smith, J.D. and Robinson, A. S. (2002)
“Expression of an archael enzyme in a eucaryotic host: A
secretion bottleneck at the ER,” Biotech. Bioeng.,
79, 7, p. 713-723. DOI: 10.1002/bit.10367
- Blumentals, I. I., Robinson, A. S. and
Kelly, R. M.. (1990). "Characterization of Sodium Dodecyl
Sulfate Resistant Proteolytic Activity in the
Hyperthermophilic Archaebacterium Pyrococcus furiosus."
Appl. Envir. Microbiol. 56, 1992-1998.
- Blumentals, I.I., S.H. Brown, R.N. Schicho, A.K.
Skaja [Robinson], H.R. Costantino, and R.M.
Kelly . (1990) “The Hyperthermophilic Archaebacterium, Pyrococcus
furiosus: Development of Culturing Protocols,
Perspectives on Scale-Up, and Potential Applications.” Ann.
N.Y. Acad. Sci., 589, 301-314.
- Kelly, R.M., Robinson,A.K.S., I.I.
Blumentals, S.H. Brown, and C.B. Anfinsen. “Proteolytic
Enzymes from Hyperthermophilic Bacteria and Processes for
Their Production.”
Patent # 5,242,817. Filed 9/12/89. Accepted 9/7/93.
Licensed to Takara Shuzo.
Other
- St. Amand, M.M., Radhakrishnan, D., Robinson,
A.S., Ogunnaike, B.A.* (2014) "Identification of
Manipulated Variables for a Glycosulation Control
Strategy", Biotech
Bioeng, Oct;111(10):1957-70.
- St. Amand, M.M., Tran, K.†, Radhakrishnan, D., Robinson,
A.S., Ogunnaike, B.A.* (2014) "Controllability
Analysis of Protein Glycosylation in CHO cells", PLoS
One, 9(2): e87973
- St. Amand, M., Ogunnaike, B.A., and Robinson,
A.S.* (2014) "Development of At-Line Assay to
Monitor Charge Variants of mAbs During Production", Biotechnology
Progress, 30: 249–255.
- Blumentals, I. I., Kelly, R. M., A. K. Skaja
[Robinson] and J. Shiloach. (1987) "Effect of
Culturing Conditions on the Production of Exotoxin A by Pseudomonas
aeruginosa." Ann N Y Acad. Sci. 506,
663-668.
- Forsten-Williams*, K.F., Cassino, T.R, Delo, L.J.,
Bellis, A.D., Robinson, A.S., and Ryan, T.E.,
(2007) Enhanced Insulin-like Growth Factor-I (IGF-I) Cell
Association at Reduced pH is Dependent on IGF Binding
Protein-3 (IGFBP-3) Interaction, Journal of Cellular
Physiology, 210(2):298-308.
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